References of soil microorganism identification

Answer 1

Identifying soil microorganisms is essential for understanding soil health, ecology, and various biogeochemical processes. Below are some references and resources that can help you in identifying soil microorganisms:

Books

1. "Soil Microbiology" by Eldor Paul

   • A comprehensive book covering various aspects of soil microbiology, including identification and characterization of soil microorganisms.

2. "Bacterial Diversity in Ecosystems" by Michael A. McNeill and Ian A. M. Stewart

   • Discusses techniques for identifying bacterial diversity in various ecosystems, including soils.

3. "Methods in Microbiology" Series

   • Different volumes in this series present various methodologies for microbial identification and characterization.

Journals

1. "Soil Biology & Biochemistry"

   • This journal publishes research articles focusing on the interactions among soil microorganisms and their environment, including identification methods.

2. "European Journal of Soil Biology"

   • Offers insights into soil microbial ecology, including methodologies for identification.

3. "Applied and Environmental Microbiology"

   • Publishes research on microbial identification and the role of microorganisms in environmental processes.

Research Articles

1. Baker, K. F., & Cook, R. J. (1974). "Biology of Plant Pathology."

   • Addresses methods for identifying soil-borne pathogens, providing insights into various microbiological techniques.

2. Rousk, J., Brookes, P. C., & Baath, E. (2010). "Contrasting soil bacterial and fungal growth responses to carbon sources." Ecology.

   • Discusses methods for assessing bacterial and fungal communities in soils.

Identification Techniques & Resources

1. Molecular Techniques

   • Techniques like PCR, DNA sequencing (e.g., 16S rRNA gene sequencing for bacteria and ITS sequencing for fungi), and metagenomics are fundamental for soil microbial identification.

2. Culture Techniques

   • Traditional culturing methods, including selective media, can help isolate specific soil microorganisms.

3. Online Tools

   • The Global Biodiversity Information Facility (GBIF) and microbiome databases such as NCBI provide resources for microbial identification.

4. Field Guides and Manuals

   • Some field guides focus on specific groups of microorganisms, like fungi or bacteria, including how to culture and identify them.

Websites

• International Society for Microbial Ecology (ISME): Offers resources and research articles focused on microbial ecology, including soil microorganisms.
• ASM (American Society for Microbiology): Publishes resources and guidelines for microbiology practices, which can include soil microbiology.

These references should provide a solid starting point for identifying soil microorganisms. For specific methodologies, research articles in peer-reviewed journals can provide up-to-date and detailed protocols.