1.How many water molecules are lost from the condensation
of 100 amino acids into a polypeptide?
2.Amino acids are connected via __________ bonds, which
occur between the carboxyl group of one amino acid and the
amino group of another.
3 . In how many different ways can the amino acids leucine,
glutamate, and glycine be arranged?
4 .A new drug is developed which selectively cleaves covalent
bonds between two sulfur atoms of non-adjacent amino acids
in a polypeptide chain. Which level of protein structure in
affected molecules would be most directly affected by the
drug?
5.Albumin is a large protein which circulates freely in human plasma. Another
type of protein, called aquaporins, act as a channel for water to enter and exit a
cell, and are located within the lipid bilayer of a cell’s plasma membrane. Based
on their physiological locations, how would the tertiary structure of these two
proteins mostly likely compare?(choose below)
a. Albumin has more of nonpolar core with nonpolar out layer while
aquaporins have a more polar core with polar outer layer.
b. Albumin has more of nonpolar core with polar outer later while
aquaporins have more polar core with nonpolar outer layer.
c. Albumin has more polar core with non polar outer layer while
aquaporins have a more of non polar core with polar outer layer
d. Albumin has more polar core with polar outer layer while aquaporins
have a more of non polar core with non polar outer layer
6.The major protein component of human hair is α-keratin.
Hair ‘straighteners’ are commonly used tools which use heat
to iron hair into temporarily lying flat and straight. What is
the best biological explanation for this phenomenon?(choose below)
a. Hair straitner denatures protein by disrupting the PH
b. Hair straitner disrupt hydrogen bonds in α-keratin
c. Hair stratner disrupt ionic bonds between α-keratin
molecules
d. Hair straitner disrupt disulphide bridges in α-keratin
7.A group of researchers isolate ‘Protein X’ from the wall of a human
stomach with the intent of learning how to synthesize stomach tissue
in the lab. Subsequently, they determine the exact sequence of amino
acids of the protein in its unfolded state, and create a functional
mRNA template to translate Protein X in vitro. They manage to
translate an exact copy of the polypeptide chain in the lab, but then
realize that it takes several days for the protein to fold into its final
tertiary structure. In vivo, they observe that several thousand copies
of Protein X are folded from polypeptide chains every minute. What
is NOT a plausible explanation for this difference in folding times?(choose below)
a. The in vitro study lacks key enzymes
b. The temperature in vitro is too low
c. The in vitro study lacks key tRNA molecule
d. The in vitro PH is too high
8.A certain genetic disorder prevents the production of
signalling molecules which direct the intracellular trafficking
of proteins. If the disease exclusively affects the signal which
directs proteins to the proteasome, what primary effect
would most likely be observed?(choose below).
a. Increased synthesis of proteins
b. Decreased degradation of proteins
c. Increased degradation of proteins
d. Decreased synthesis of proteins
9 .If the Golgi apparatus were damaged by an ingested toxin,
what aspect of protein synthesis would be most affected?(choose below)
a. Translation
b. Beta sheet formation
c. Protein glycosylation
d. Alpha helix formation
10 . A nonsense mutation has occurred in the DNA segment
which codes for “protein A”. After it has been transcribed and
translated, what is the most likely product formed from this
mutated region?(Choose below).
a. A small, truncated, nonfunctional “protein A”
b. A product that differs in only a single amino acid from
“protein A”
c. A product that differs in only a single base pair from “protein
A”, but with entirely different amino acids
d. A normally shaped, fully functional “protein A”
10 .Outline factors which does not affect pKa
value of an amino
acid
11. The following piece of double stranded DNA encodes a very
short peptide. In the space below, write the sequence of
mRNA that would be synthesized by RNA polymerase from
this piece of DNA if the bottom strand is the template. Then
write the protein sequence in one-letter code that would be
synthesized by the ribosome from that mRNA using the first
reading frame (use Genetic Code Table below).
i. 5’-ATGGCTGGGTGCTTTTAA-3’
ii. 3’ –TACCGACCCACGAAAATT-5
3 answers
2. Amino acids are connected via peptide bonds, which occur between the carboxyl group of one amino acid and the amino group of another.
3. The amino acids leucine, glutamate, and glycine can be arranged in 6 different ways (LLL, LLG, LGL, GLG, GLL, GGL).
4. The tertiary structure of affected molecules would be most directly affected by the drug.
5. b. Albumin has more of a nonpolar core with a polar outer layer while aquaporins have a more polar core with a nonpolar outer layer.
6. d. Hair straighteners disrupt disulphide bridges in α-keratin.
7. c. The in vitro study lacks key tRNA molecule.
8. b. Decreased degradation of proteins.
9. c. Protein glycosylation would be most affected.
10. a. A small, truncated, nonfunctional "protein A" would most likely be formed from the mutated region.
11. i. 5'-AUGGCUGGGUGCUUUUAA-3' ii. Met-Leu-Gly-Cys-Phe.